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Lancet Infect Dis. Comparison of community- and healthcare-associated methicillin-resistant Staphylococcus aureus infection.
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Clinical and Laboratory Standards Institute. Performance standards for antimicrobial susceptibility testing. Combination of multiplex PCRs for staphylococcal cassette chromosome mec type assignment: rapid identification system for mec, ccr, and major differences in junkyard regions. Antimicrob Agents Chemother. Rapid and specific detection of toxigenic Staphylococcus aureus : use of two multiplex PCR enzyme immunoassays for amplification and hybridization of staphylococcal enterotoxin genes, exfoliative toxin genes, and toxic shock syndrome toxin 1 gene.
J Clin Microbiol. Two different Panton-valentine leukocidin phage lineages predominate in Japan. Use of multiplex PCR to detect classical and newly described pyrogenic toxin genes in staphylococcal isolates. Interpreting chromosomal DNA restriction patterns produced by pulsed-field gel electrophoresis: criteria for bacterial strain typing. Identification of acquired antimicrobial resistance genes. J Antimicrob Chemother. Real-time whole-genome sequencing for routine typing, surveillance, and outbreak detection of verotoxigenic Escherichia coli.
Comparing whole-genome sequencing with sanger sequencing for spa typing of methicillin-resistant Staphylococcus aureus.
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Multilocus sequence typing of total-genome-sequenced bacteria. Genome Announcements. Solving the problem of comparing whole bacterial genomes across different sequencing platforms. PLoS One. The RAST server: rapid annotations using subsystems technology. BMC Genomics. Nucleic Acids Res. VISTA: computational tools for comparative genomics.
Whole genome sequencing of meticillin-resistant Staphylococcus aureus. The emerging ST8 methicillin-resistant Staphylococcus aureus clone in the community in Japan: associated infections, genetic diversity, and comparative genomics. BMC Microbiol.
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Udo EE, Sarkhoo E. Ann Clin Microbiol Antimicrob. Emergence of community-associated methicillin-resistant Staphylococcus aureus carriage in children in Cambodia. Am J Trop Med Hyg. Ministry of Health, Labour and Welfare of Japan. Accessed 4 July Differences in methicillin-resistant Staphylococcus aureus strains isolated from pediatric and adult patients from hospitals in a large county in California. Contrasting pediatric and adult methicillin-resistant Staphylococcus aureus isolates.
Emerg Infect Dis. A comparison of adult and pediatric methicillin-resistant Staphylococcus aureus isolates collected from patients at a university hospital in Korea. J Microbiol. Int J Pediatr.
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Dissemination of methicillin-resistant staphylococci among healthy Japanese children. Rapid whole-genome sequencing for investigation of a neonatal MRSA outbreak. New Engl J Med. Whole-genome sequencing for analysis of an outbreak of meticillin-resistant Staphylococcus aureus : a descriptive study. Genetic structure of community-acquired methicillin-resistant Staphylococcus aureus USA Isolation and characterization of methicillin-resistant Staphylococcus aureus from swine and workers in China. Methicillin-resistant Staphylococcus aureus ST9 in pigs in Thailand.
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Prevalence of ST9 methicillin-resistant Staphylococcus aureus among pigs and pig handlers in Malaysia. BMC Infect Dis. Genomic basis for methicillin resistance in Staphylococcus aureus. Infect Chemother. Download references.
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The funders had no role in the design of the study, collection, analysis and interpretation of data, or writing the manuscript. Other data analyzed in this study are included within the article and its additional files. All authors read and approved the final manuscript. Correspondence to Yuki Uehara. Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Table S1. Patient clinical information and molecular epidemiological analysis of MRSA strains a Saitama5 was found by routine nasal screening culture before scheduled orthopedic surgery. XLSX 13 kb. Table S2. Detailed results of whole genome sequencing a SNPs, single nucleotide polymorphisms. XLSX 12 kb.
Table S3. XLSX 10 kb. Reprints and Permissions. Uehara, Y. Regional outbreak of community-associated methicillin-resistant Staphylococcus aureus ST in Japanese children. BMC Infect Dis 19, 35 Download citation. Received : 15 September Accepted : 20 December Published : 09 January Skip to main content.
Search all BMC articles Search. Download PDF. Methods CA-MRSA strains isolated from infected patients who required hospitalization for treatment were evaluated in this study. Background Community-associated methicillin-resistant Staphylococcus aureus CA-MRSA infection is a major concern worldwide and has recently become a challenging problem in Japan [ 1 , 2 ]. Pulsed-field gel electrophoresis Pulsed-field gel electrophoresis PFGE by using SmaI digestion was performed as previously reported, and BioNumerics software version 7.
Phylogenic analysis and comparison of the strains using whole genome sequences Whole genome sequences of the strains were submitted to CSI phylogeny 1. Phylogenic analysis by pulsed-field gel electrophoresis and whole genome sequencing Figure 1 shows the result of phylogenic analysis of the MRSA strains with known complete whole genome sequences and the 10 MRSA strains in this study.
Full size image. References 1.
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Acknowledgements This study is dedicated to the late Dr. Teruyo Ito. View author publications. Ethics declarations Ethics approval and consent to participate Ethical approval was obtained from the Institutional Review Board of Juntendo University Faculty of Medicine approval number Consent for publication Not applicable. Competing interests All authors declare that they have no competing interests. Additional files. Once we are at the Textirama awards, then your idea becomes public and therefore it is better to protect your idea upfront. You can register your idea or product online via the BOIP website.
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